Mycobacterium tuberculosis CDC1551 (MtC)

Mycobacterium tuberculosis CDC1551

Species: MtC (Taxonomy ID: 83331)
Unicellular Group: Actinobacteria
MtC has total 192987 sequences from NCBI.

Parameters used for this clustering:
e_1 = e-10: E-value threshold for BLAST
a_1 = 20 residues: minimum overlap between 2 alignments

Cluster       1:     50 (sequences) =     50 (from       1 COG) +       0 (from non-COG)
Node Degree:     46 = min,     49 = max,     48.72 = avg,       1 connected components

Cluster       2:     41 (sequences) =       0 (from       0 COG) +     41 (from non-COG)
Node Degree:     37 = min,     40 = max,     39.37 = avg,       1 connected components

Cluster       3:     19 (sequences) =     19 (from       2 COG) +       0 (from non-COG)
Node Degree:     18 = min,     18 = max,     18.00 = avg,       1 connected components

Cluster       4:     42 (sequences) =     28 (from       2 COG) +     14 (from non-COG)
Node Degree:     12 = min,     14 = max,     12.86 = avg,       3 connected components

Cluster       5:     18 (sequences) =     18 (from       3 COG) +       0 (from non-COG)
Node Degree:     12 = min,     17 = max,     15.11 = avg,       1 connected components

Cluster       6:     13 (sequences) =     13 (from       1 COG) +       0 (from non-COG)
Node Degree:     11 = min,     12 = max,     11.85 = avg,       1 connected components

Cluster       7:     11 (sequences) =     11 (from       1 COG) +       0 (from non-COG)
Node Degree:     10 = min,     10 = max,     10.00 = avg,       1 connected components

Cluster       8:     21 (sequences) =     21 (from       1 COG) +       0 (from non-COG)
Node Degree:     10 = min,     16 = max,     13.24 = avg,       1 connected components

Cluster       9:     20 (sequences) =     20 (from       2 COG) +       0 (from non-COG)
Node Degree:       9 = min,       9 = max,       9.00 = avg,       2 connected components

Cluster     10:     27 (sequences) =     27 (from       5 COG) +       0 (from non-COG)
Node Degree:       8 = min,       8 = max,       8.00 = avg,       3 connected components

Cluster     11:     12 (sequences) =     12 (from       1 COG) +       0 (from non-COG)
Node Degree:       8 = min,     11 = max,       9.50 = avg,       1 connected components

Cluster     12:     24 (sequences) =     24 (from       3 COG) +       0 (from non-COG)
Node Degree:       7 = min,       7 = max,       7.00 = avg,       3 connected components

Cluster     13:       7 (sequences) =       7 (from       1 COG) +       0 (from non-COG)
Node Degree:       6 = min,       6 = max,       6.00 = avg,       1 connected components

Cluster     14:     57 (sequences) =     39 (from       6 COG) +     18 (from non-COG)
Node Degree:       5 = min,       8 = max,       5.16 = avg,       9 connected components

Cluster     15:       7 (sequences) =       7 (from       1 COG) +       0 (from non-COG)
Node Degree:       5 = min,       6 = max,       5.43 = avg,       1 connected components

Cluster     16:     95 (sequences) =     80 (from     20 COG) +     15 (from non-COG)
Node Degree:       4 = min,       6 = max,       4.21 = avg,     18 connected components

Cluster     17:   179 (sequences) =   166 (from     41 COG) +     13 (from non-COG)
Node Degree:       3 = min,       6 = max,       3.20 = avg,     41 connected components

Cluster     18:     20 (sequences) =     10 (from       2 COG) +     10 (from non-COG)
Node Degree:       3 = min,       9 = max,       3.70 = avg,       3 connected components

Cluster     19:   221 (sequences) =   187 (from     69 COG) +     34 (from non-COG)
Node Degree:       2 = min,       5 = max,       2.13 = avg,     69 connected components

Number of our clusters (SuperClusters) having:
all sequences from COG = 12
all sequences from non-COG = 1
mixture of COG and non-COG = 6
Total number of connected components (ParalogClusters) = 161
Organism MtC: 884 sequences are covered by our 19 clusters.
Among these 884 sequences 739 sequences are classified in 162 COG and 145 sequences are not in COG.
Number of COG clusters containing this organsim: 1434 (total number of COG clusters in COG: 4873)
Number of sequences in these COGs: 2422 (total number of sequences in COG: 144320)

Cluster 1 of MtC

Total 50 sequences in this cluster
50 in 1 COG and 0 not classified by COG.
Node Degree:     46 = min,     49 = max,     48.72 = avg,       1 connected component.
Most common functional categories in order:
50 [N] CELLULAR PROCESSES AND SIGNALING : Cell motility

    Connected component # 1/1
  1. MT0469 [N] COG5651 (518) PPE-repeat proteins
  2. MT0779 [N] COG5651 (646) PPE-repeat proteins
  3. MT0901 [N] COG5651 (444) PPE-repeat proteins
  4. MT0940 [N] COG5651 (426) PPE-repeat proteins
  5. MT1599 [N] COG5651 (760) PPE-repeat proteins
  6. MT1745 [N] COG5651 (385) PPE-repeat proteins
  7. MT1746 [N] COG5651 (394) PPE-repeat proteins
  8. MT1796 [N] COG5651 (1105) PPE-repeat proteins
  9. MT2959 [N] COG5651 (408) PPE-repeat proteins
  10. MT1836 [N] COG5651 (405) PPE-repeat proteins
  11. MT0318 [N] COG5651 (3186) PPE-repeat proteins
  12. MT3101 [N] COG5651 (310) PPE-repeat proteins
  13. MT1838 [N] COG5651 (411) PPE-repeat proteins
  14. MT1205 [N] COG5651 (346) PPE-repeat proteins
  15. MT3209 [N] COG5651 (391) PPE-repeat proteins
  16. MT1839 [N] COG5651 (363) PPE-repeat proteins
  17. MT3221 [N] COG5651 (380) PPE-repeat proteins
  18. MT1849 [N] COG5651 (655) PPE-repeat proteins
  19. MT3231 [N] COG5651 (409) PPE-repeat proteins
  20. MT1850 [N] COG5651 (423) PPE-repeat proteins
  21. MT3247 [N] COG5651 (603) PPE-repeat proteins
  22. MT1851 [N] COG5651 (463) PPE-repeat proteins
  23. MT3248 [N] COG5651 (686) PPE-repeat proteins
  24. MT3582 [N] COG5651 (393) PPE-repeat proteins
  25. MT3637 [N] COG5651 (582) PPE-repeat proteins
  26. MT3643 [N] COG5651 (479) PPE-repeat proteins
  27. MT1431 [N] COG5651 (539) PPE-repeat proteins
  28. MT2505 [N] COG5651 (223) PPE-repeat proteins
  29. MT1856.1 [N] COG5651 (386) PPE-repeat proteins
  30. MT0269 [N] COG5651 (556) PPE-repeat proteins
  31. MT1856 [N] COG5651 (403) PPE-repeat proteins
  32. MT1968 [N] COG5651 (1491) PPE-repeat proteins
  33. MT1969 [N] COG5651 (1013) PPE-repeat proteins
  34. MT0370 [N] COG5651 (3275) PPE-repeat proteins
  35. MT2167 [N] COG5651 (243) PPE-repeat proteins
  36. MT1068 [N] COG5651 (391) PPE-repeat proteins
  37. MT2419 [N] COG5651 (391) PPE-repeat proteins
  38. MT1168 [N] COG5651 (636) PPE-repeat proteins
  39. MT2422 [N] COG5651 (415) PPE-repeat proteins
  40. MT1234 [N] COG5651 (391) PPE-repeat proteins
  41. MT2423 [N] COG5651 (621) PPE-repeat proteins
  42. MT1406 [N] COG5651 (396) PPE-repeat proteins
  43. MT2425 [N] COG5651 (615) PPE-repeat proteins
  44. MT2683 [N] COG5651 (580) PPE-repeat proteins
  45. MT2838 [N] COG5651 (462) PPE-repeat proteins
  46. MT2840 [N] COG5651 (402) PPE-repeat proteins
  47. MT3663 [N] COG5651 (623) PPE-repeat proteins
  48. MT3723 [N] COG5651 (413) PPE-repeat proteins
  49. MT0400 [N] COG5651 (443) PPE-repeat proteins
  50. MT0458 [N] COG5651 (487) PPE-repeat proteins
    50 nodes with Node Degree:     46 = min,     49 = max,     48.72 = avg
     

Cluster 2 of MtC

Total 41 sequences in this cluster
0 in 0 COG and 41 not classified by COG.
Node Degree:     37 = min,     40 = max,     39.37 = avg,       1 connected component.
Most common functional categories in order:

    Connected component # 1/1
  1. MT0169 Not in COG (502)
  2. MT1280.1 Not in COG (586)
  3. MT3449 Not in COG (1507)
  4. MT0160 Not in COG (588)
  5. MT3476 Not in COG (628)
  6. MT1888 Not in COG (515)
  7. MT0556 Not in COG (622)
  8. MT2668.1 Not in COG (505)
  9. MT2919 Not in COG (663)
  10. MT2220 Not in COG (532)
  11. MT1499 Not in COG (738)
  12. MT0854 Not in COG (150)
  13. MT0855 Not in COG (879)
  14. MT0894 Not in COG (609)
  15. MT3701 Not in COG (436)
  16. MT1853 Not in COG (650)
  17. MT0118 Not in COG (533)
  18. MT1866 Not in COG (491)
  19. MT2812 Not in COG (454)
  20. MT0132 Not in COG (561)
  21. MT3495 Not in COG (775)
  22. MT2561 Not in COG (694)
  23. MT2564 Not in COG (1665)
  24. MT1123 Not in COG (635)
  25. MT2595 Not in COG (501)
  26. MT2467.1 Not in COG (382)
  27. MT1497.1 Not in COG (1408)
  28. MT2036 Not in COG (558)
  29. MT1097 Not in COG (533)
  30. MT1689 Not in COG (1011)
  31. MT1514.1 Not in COG (375)
  32. MT1096.1 Not in COG (667)
  33. MT1008_1 Not in COG (302)
  34. MT2690 Not in COG (476)
  35. MT1006.1_1 Not in COG (229)
  36. MT3615.3 Not in COG (1217)
  37. MT3696 Not in COG (584)
  38. MT2159 Not in COG (491)
  39. MT2712 Not in COG (788)
  40. MT3612.1 Not in COG (1715)
  41. MT0607 Not in COG (1306)
    41 nodes with Node Degree:     37 = min,     40 = max,     39.37 = avg
     

Cluster 3 of MtC

Total 19 sequences in this cluster
19 in 2 COG and 0 not classified by COG.
Node Degree:     18 = min,     18 = max,     18.00 = avg,       1 connected component.
Most common functional categories in order:
19 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
2 [I] METABOLISM : Lipid transport and metabolism

    Connected component # 1/1
  1. MT2305 [IQ] COG0304 (416) 3-oxoacyl-(acyl-carrier-protein) synthase
  2. MT2306 [IQ] COG0304 (417) 3-oxoacyl-(acyl-carrier-protein) synthase
  3. MT1701 [Q] COG3321 (2126) Polyketide synthase modules and related proteins
  4. MT1702 [Q] COG3321 (1602) Polyketide synthase modules and related proteins
  5. MT1704 [Q] COG3321 (1017) Polyketide synthase modules and related proteins
  6. MT3907_1 [Q] COG3321 (1460) Polyketide synthase modules and related proteins
  7. MT0418_1 [Q] COG3321 (1163) Polyketide synthase modules and related proteins
  8. MT3005_1 [Q] COG3321 (1027) Polyketide synthase modules and related proteins
  9. MT3000 [Q] COG3321 (1876) Polyketide synthase modules and related proteins
  10. MT3002 [Q] COG3321 (1538) Polyketide synthase modules and related proteins
  11. MT3003 [Q] COG3321 (2188) Polyketide synthase modules and related proteins
  12. MT3004 [Q] COG3321 (1827) Polyketide synthase modules and related proteins
  13. MT3021.1 [Q] COG3321 (496) Polyketide synthase modules and related proteins
  14. MT2450 [Q] COG3321 (446) Polyketide synthase modules and related proteins
  15. MT3010 [Q] COG3321 (2111) Polyketide synthase modules and related proteins
  16. MT1218 [Q] COG3321 (2101) Polyketide synthase modules and related proteins
  17. MT2108_2 [Q] COG3321 (2096) Polyketide synthase modules and related proteins
  18. MT3933 [Q] COG3321 (2126) Polyketide synthase modules and related proteins
  19. MT2108_1 [Q] COG3321 (2055) Polyketide synthase modules and related proteins
    19 nodes with Node Degree:     18 = min,     18 = max,     18.00 = avg
     

Cluster 4 of MtC

Total 42 sequences in this cluster
28 in 2 COG and 14 not classified by COG.
Node Degree:     12 = min,     14 = max,     12.86 = avg,       3 connected components.
Most common functional categories in order:
28 [I] METABOLISM : Lipid transport and metabolism
13 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism

    Connected component # 1/3
  1. MT2557 Not in COG (491)
  2. MT3481 Not in COG (446)
  3. MT1809 Not in COG (531)
  4. MT2343 Not in COG (445)
  5. MT3172 Not in COG (473)
  6. MT3173 Not in COG (474)
  7. MT0919 Not in COG (520)
  8. MT3216 Not in COG (463)
  9. MT3839 Not in COG (454)
  10. MT3848 Not in COG (448)
  11. MT0231 Not in COG (449)
  12. MT3584 Not in COG (505)
  13. MT1468 Not in COG (605)
  14. MT3331 Not in COG (271)
    14 nodes with Node Degree:     12 = min,     13 = max,     12.86 = avg
     
    Connected component # 2/3
  15. MT3227 [I] COG1960 (401) Acyl-CoA dehydrogenases
  16. MT3608 [I] COG1960 (400) Acyl-CoA dehydrogenases
  17. MT2859 [I] COG1960 (410) Acyl-CoA dehydrogenases
  18. MT0896 [I] COG1960 (650) Acyl-CoA dehydrogenases
  19. MT0776 [I] COG1960 (390) Acyl-CoA dehydrogenases
  20. MT1000 [I] COG1960 (388) Acyl-CoA dehydrogenases
  21. MT1003 [I] COG1960 (382) Acyl-CoA dehydrogenases
  22. MT2796 [I] COG1960 (386) Acyl-CoA dehydrogenases
  23. MT0410 [I] COG1960 (396) Acyl-CoA dehydrogenases
  24. MT0139 [I] COG1960 (447) Acyl-CoA dehydrogenases
  25. MT2575 [I] COG1960 (394) Acyl-CoA dehydrogenases
  26. MT0225 [I] COG1960 (373) Acyl-CoA dehydrogenases
  27. MT0163 [I] COG1960 (407) Acyl-CoA dehydrogenases
  28. MT3647 [I] COG1960 (387) Acyl-CoA dehydrogenases
  29. MT3374 [I] COG1960 (389) Acyl-CoA dehydrogenases
    15 nodes with Node Degree:     12 = min,     14 = max,     13.60 = avg
     
    Connected component # 3/3
  30. MT1041 [IQ] COG0318 (537) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  31. MT0417 [IQ] COG0318 (585) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  32. MT3011 [IQ] COG0318 (580) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  33. MT3023 [IQ] COG0318 (582) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  34. MT1976 [IQ] COG0318 (620) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  35. MT3908 [IQ] COG0318 (629) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  36. MT1222 [IQ] COG0318 (578) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  37. MT0040 [IQ] COG0318 (562) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  38. MT3934 [IQ] COG0318 (584) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  39. MT2999 [IQ] COG0318 (583) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  40. MT1387 [IQ] COG0318 (465) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  41. MT1572 [IQ] COG0318 (583) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  42. MT1580 [IQ] COG0318 (584) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
    13 nodes with Node Degree:     12 = min,     12 = max,     12.00 = avg
     

Cluster 5 of MtC

Total 18 sequences in this cluster
18 in 3 COG and 0 not classified by COG.
Node Degree:     12 = min,     17 = max,     15.11 = avg,       1 connected component.
Most common functional categories in order:
17 [I] METABOLISM : Lipid transport and metabolism
17 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism

    Connected component # 1/1
  1. MT3021 [IQ] COG0318 (705) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  2. MT1793 [IQ] COG0318 (532) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  3. MT0108 [IQ] COG0318 (540) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  4. MT3174 [IQ] COG0318 (503) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  5. MT0127 [IQ] COG0318 (542) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  6. MT0175 [IQ] COG0318 (518) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  7. MT2580 [IQ] COG0318 (547) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  8. MT0224 [IQ] COG0318 (537) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  9. MT1088 [IQ] COG0318 (543) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  10. MT3666 [IQ] COG0318 (500) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  11. MT1470 [IQ] COG0318 (535) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  12. MT0577 [IQ] COG0318 (571) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  13. MT0283 [IQ] COG0318 (560) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  14. MT3610 [IQ] COG0318 (502) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  15. MT1230 [IQ] COG0318 (473) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  16. MT3616 [IQ] COG0318 (548) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  17. MT3768 [I] COG0365 (651) Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
  18. MT2452 [Q] COG1021 (565) Peptide arylation enzymes
    18 nodes with Node Degree:     12 = min,     17 = max,     15.11 = avg
     

Cluster 6 of MtC

Total 13 sequences in this cluster
13 in 1 COG and 0 not classified by COG.
Node Degree:     11 = min,     12 = max,     11.85 = avg,       1 connected component.
Most common functional categories in order:
13 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism

    Connected component # 1/1
  1. MT1937 [Q] COG3315 (118) O-Methyltransferase involved in polyketide biosynthesis
  2. MT0851 [Q] COG3315 (301) O-Methyltransferase involved in polyketide biosynthesis
  3. MT0751 [Q] COG3315 (367) O-Methyltransferase involved in polyketide biosynthesis
  4. MT0756 [Q] COG3315 (318) O-Methyltransferase involved in polyketide biosynthesis
  5. MT0917 [Q] COG3315 (325) O-Methyltransferase involved in polyketide biosynthesis
  6. MT0153 [Q] COG3315 (317) O-Methyltransferase involved in polyketide biosynthesis
  7. MT3507 [Q] COG3315 (348) O-Methyltransferase involved in polyketide biosynthesis
  8. MT1947 [Q] COG3315 (303) O-Methyltransferase involved in polyketide biosynthesis
  9. MT3874 [Q] COG3315 (314) O-Methyltransferase involved in polyketide biosynthesis
  10. MT3895 [Q] COG3315 (308) O-Methyltransferase involved in polyketide biosynthesis
  11. MT0293 [Q] COG3315 (302) O-Methyltransferase involved in polyketide biosynthesis
  12. MT1770 [Q] COG3315 (312) O-Methyltransferase involved in polyketide biosynthesis
  13. MT0154 [Q] COG3315 (313) O-Methyltransferase involved in polyketide biosynthesis
    13 nodes with Node Degree:     11 = min,     12 = max,     11.85 = avg
     

Cluster 7 of MtC

Total 11 sequences in this cluster
11 in 1 COG and 0 not classified by COG.
Node Degree:     10 = min,     10 = max,     10.00 = avg,       1 connected component.
Most common functional categories in order:
11 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism

    Connected component # 1/1
  1. MT2328 [Q] COG2124 (428) Cytochrome P450
  2. MT2330 [Q] COG2124 (489) Cytochrome P450
  3. MT1827 [Q] COG2124 (434) Cytochrome P450
  4. MT1834 [Q] COG2124 (426) Cytochrome P450
  5. MT1295 [Q] COG2124 (405) Cytochrome P450
  6. MT3203 [Q] COG2124 (400) Cytochrome P450
  7. MT1929 [Q] COG2124 (429) Cytochrome P450
  8. MT3619 [Q] COG2124 (372) Cytochrome P450
  9. MT3649 [Q] COG2124 (433) Cytochrome P450
  10. MT0802 [Q] COG2124 (414) Cytochrome P450
  11. MT0790 [Q] COG2124 (402) Cytochrome P450
    11 nodes with Node Degree:     10 = min,     10 = max,     10.00 = avg
     

Cluster 8 of MtC

Total 21 sequences in this cluster
21 in 1 COG and 0 not classified by COG.
Node Degree:     10 = min,     16 = max,     13.24 = avg,       1 connected component.
Most common functional categories in order:
21 [I] METABOLISM : Lipid transport and metabolism
21 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
21 [R] POORLY CHARACTERIZED : General function prediction only

    Connected component # 1/1
  1. MT3498_2 [IQR] COG1028 (305) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  2. MT1080 [IQR] COG1028 (302) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  3. MT3606 [IQR] COG1028 (337) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  4. MT3652 [IQR] COG1028 (316) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  5. MT3664 [IQR] COG1028 (262) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  6. MT0156 [IQR] COG1028 (293) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  7. MT0715 [IQR] COG1028 (275) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  8. MT1914 [IQR] COG1028 (286) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  9. MT2270_2 [IQR] COG1028 (296) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  10. MT1991 [IQR] COG1028 (256) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  11. MT2187 [IQR] COG1028 (310) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  12. MT2925 [IQR] COG1028 (258) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  13. MT0793 [IQR] COG1028 (248) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  14. MT2058 [IQR] COG1028 (260) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  15. MT2820 [IQR] COG1028 (272) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  16. MT1393 [IQR] COG1028 (247) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  17. MT3143 [IQR] COG1028 (287) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  18. MT1283 [IQR] COG1028 (276) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  19. MT0874 [IQR] COG1028 (278) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  20. MT3170 [IQR] COG1028 (276) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  21. MT1595 [IQR] COG1028 (300) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
    21 nodes with Node Degree:     10 = min,     16 = max,     13.24 = avg
     

Cluster 9 of MtC

Total 20 sequences in this cluster
20 in 2 COG and 0 not classified by COG.
Node Degree:       9 = min,       9 = max,       9.00 = avg,       2 connected components.
Most common functional categories in order:
20 [R] POORLY CHARACTERIZED : General function prediction only
10 [K] INFORMATION STORAGE AND PROCESSING : Transcription
10 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair
10 [T] CELLULAR PROCESSES AND SIGNALING : Signal transduction mechanisms

    Connected component # 1/2
  1. MT0958_1 [RTKL] COG0515 (410) Serine/threonine protein kinase
  2. MT2982 [RTKL] COG0515 (603) Serine/threonine protein kinase
  3. MT2232 [RTKL] COG0515 (399) Serine/threonine protein kinase
  4. MT1788 [RTKL] COG0515 (476) Serine/threonine protein kinase
  5. MT1785_1 [RTKL] COG0515 (391) Serine/threonine protein kinase
  6. MT0017_1 [RTKL] COG0515 (428) Serine/threonine protein kinase
  7. MT3165_1 [RTKL] COG0515 (345) Serine/threonine protein kinase
  8. MT1304 [RTKL] COG0515 (626) Serine/threonine protein kinase
  9. MT2149 [RTKL] COG0515 (589) Serine/threonine protein kinase
  10. MT0018 [RTKL] COG0515 (431) Serine/threonine protein kinase
    10 nodes with Node Degree:       9 = min,       9 = max,       9.00 = avg
     
    Connected component # 2/2
  11. MT3931 [R] COG2409 (1089) Predicted drug exporters of the RND superfamily
  12. MT1802 [R] COG2409 (945) Predicted drug exporters of the RND superfamily
  13. MT0705 [R] COG2409 (964) Predicted drug exporters of the RND superfamily
  14. MT1573 [R] COG2409 (1146) Predicted drug exporters of the RND superfamily
  15. MT0412 [R] COG2409 (958) Predicted drug exporters of the RND superfamily
  16. MT0528 [R] COG2409 (968) Predicted drug exporters of the RND superfamily
  17. MT0466 [R] COG2409 (967) Predicted drug exporters of the RND superfamily
  18. MT3012 [R] COG2409 (920) Predicted drug exporters of the RND superfamily
  19. MT1220 [R] COG2409 (1002) Predicted drug exporters of the RND superfamily
  20. MT2402 [R] COG2409 (962) Predicted drug exporters of the RND superfamily
    10 nodes with Node Degree:       9 = min,       9 = max,       9.00 = avg
     

Cluster 10 of MtC

Total 27 sequences in this cluster
27 in 5 COG and 0 not classified by COG.
Node Degree:       8 = min,       8 = max,       8.00 = avg,       3 connected components.
Most common functional categories in order:
9 [K] INFORMATION STORAGE AND PROCESSING : Transcription
9 [M] CELLULAR PROCESSES AND SIGNALING : Cell wall/membrane/envelope biogenesis
9 [P] METABOLISM : Inorganic ion transport and metabolism
9 [T] CELLULAR PROCESSES AND SIGNALING : Signal transduction mechanisms

    Connected component # 1/3
  1. MT1062 [TK] COG0745 (276) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  2. MT3344 [TK] COG0745 (235) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  3. MT0782 [TK] COG0745 (240) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  4. MT0510 [TK] COG0745 (230) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  5. MT0926 [TK] COG0745 (236) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  6. MT3872 [TK] COG0745 (286) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  7. MT1009 [TK] COG0745 (230) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  8. MT0631 [TK] COG0745 (247) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  9. MT1056 [TK] COG0745 (226) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
    9 nodes with Node Degree:       8 = min,       8 = max,       8.00 = avg
     
    Connected component # 2/3
  10. MT0670 [M] COG2230 (315) Cyclopropane fatty acid synthase and related methyltransferases
  11. MT0671 [M] COG2230 (301) Cyclopropane fatty acid synthase and related methyltransferases
  12. MT0672 [M] COG2230 (317) Cyclopropane fatty acid synthase and related methyltransferases
  13. MT0673 [M] COG2230 (296) Cyclopropane fatty acid synthase and related methyltransferases
  14. MT3499 [M] COG2230 (287) Cyclopropane fatty acid synthase and related methyltransferases
  15. MT3823 [M] COG2230 (427) Cyclopropane fatty acid synthase and related methyltransferases
  16. MT0524 [M] COG2230 (322) Cyclopropane fatty acid synthase and related methyltransferases
  17. MT0463 [M] COG2230 (482) Cyclopropane fatty acid synthase and related methyltransferases
  18. MT0486 [M] COG2230 (287) Cyclopropane fatty acid synthase and related methyltransferases
    9 nodes with Node Degree:       8 = min,       8 = max,       8.00 = avg
     
    Connected component # 3/3
  19. MT0931 [P] COG0474 (797) Cation transport ATPase
  20. MT1059 [P] COG2216 (709) High-affinity K+ transport system, ATPase chain B
  21. MT3370 [P] COG2217 (718) Cation transport ATPase
  22. MT0112 [P] COG2217 (752) Cation transport ATPase
  23. MT0997 [P] COG2217 (792) Cation transport ATPase
  24. MT0101 [P] COG2217 (761) Cation transport ATPase
  25. MT3851 [P] COG2217 (660) Cation transport ATPase
  26. MT1515 [P] COG2217 (657) Cation transport ATPase
  27. MT2048 [P] COG2217 (771) Cation transport ATPase
    9 nodes with Node Degree:       8 = min,       8 = max,       8.00 = avg
     

Cluster 11 of MtC

Total 12 sequences in this cluster
12 in 1 COG and 0 not classified by COG.
Node Degree:       8 = min,     11 = max,       9.50 = avg,       1 connected component.
Most common functional categories in order:
12 [I] METABOLISM : Lipid transport and metabolism

    Connected component # 1/1
  1. MT0704 [I] COG1024 (263) Enoyl-CoA hydratase/carnithine racemase
  2. MT2753 [I] COG1024 (276) Enoyl-CoA hydratase/carnithine racemase
  3. MT0928 [I] COG1024 (243) Enoyl-CoA hydratase/carnithine racemase
  4. MT1100 [I] COG1024 (257) Enoyl-CoA hydratase/carnithine racemase
  5. MT2897 [I] COG1024 (249) Enoyl-CoA hydratase/carnithine racemase
  6. MT1175 [I] COG1024 (268) Enoyl-CoA hydratase/carnithine racemase
  7. MT3617 [I] COG1024 (263) Enoyl-CoA hydratase/carnithine racemase
  8. MT0232 [I] COG1024 (262) Enoyl-CoA hydratase/carnithine racemase
  9. MT1518 [I] COG1024 (285) Enoyl-CoA hydratase/carnithine racemase
  10. MT0999.1 [I] COG1024 (269) Enoyl-CoA hydratase/carnithine racemase
  11. MT2560 [I] COG1024 (256) Enoyl-CoA hydratase/carnithine racemase
  12. MT1174 [I] COG1024 (268) Enoyl-CoA hydratase/carnithine racemase
    12 nodes with Node Degree:       8 = min,     11 = max,       9.50 = avg
     

Cluster 12 of MtC

Total 24 sequences in this cluster
24 in 3 COG and 0 not classified by COG.
Node Degree:       7 = min,       7 = max,       7.00 = avg,       3 connected components.
Most common functional categories in order:
8 [E] METABOLISM : Amino acid transport and metabolism
8 [G] METABOLISM : Carbohydrate transport and metabolism
8 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair
8 [P] METABOLISM : Inorganic ion transport and metabolism
8 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
8 [R] POORLY CHARACTERIZED : General function prediction only

    Connected component # 1/3
  1. MT2587 [L] COG3328 (436) Transposase and inactivated derivatives
  2. MT3537 [L] COG3328 (281) Transposase and inactivated derivatives
  3. MT1076 [L] COG3328 (436) Transposase and inactivated derivatives
  4. MT3107 [L] COG3328 (415) Transposase and inactivated derivatives
  5. MT3197 [L] COG3328 (436) Transposase and inactivated derivatives
  6. MT0947 [L] COG3328 (439) Transposase and inactivated derivatives
  7. MT1237 [L] COG3328 (436) Transposase and inactivated derivatives
  8. MT3742 [L] COG3328 (409) Transposase and inactivated derivatives
    8 nodes with Node Degree:       7 = min,       7 = max,       7.00 = avg
     
    Connected component # 2/3
  9. MT2912 [GEPR] COG0477 (530) Permeases of the major facilitator superfamily
  10. MT3337_1 [GEPR] COG0477 (527) Permeases of the major facilitator superfamily
  11. MT0807 [GEPR] COG0477 (545) Permeases of the major facilitator superfamily
  12. MT1289 [GEPR] COG0477 (579) Permeases of the major facilitator superfamily
  13. MT3831_1 [GEPR] COG0477 (530) Permeases of the major facilitator superfamily
  14. MT2534 [GEPR] COG0477 (523) Permeases of the major facilitator superfamily
  15. MT2395 [GEPR] COG0477 (537) Permeases of the major facilitator superfamily
  16. MT1926 [GEPR] COG0477 (687) Permeases of the major facilitator superfamily
    8 nodes with Node Degree:       7 = min,       7 = max,       7.00 = avg
     
    Connected component # 3/3
  17. MT3787 [Q] COG2124 (476) Cytochrome P450
  18. MT1439 [Q] COG2124 (461) Cytochrome P450
  19. MT0342 [Q] COG2124 (449) Cytochrome P450
  20. MT1706 [Q] COG2124 (436) Cytochrome P450
  21. MT0788 [Q] COG2124 (451) Cytochrome P450
  22. MT3145 [Q] COG2124 (492) Cytochrome P450
  23. MT0594 [Q] COG2124 (472) Cytochrome P450
  24. MT0144 [Q] COG2124 (441) Cytochrome P450
    8 nodes with Node Degree:       7 = min,       7 = max,       7.00 = avg
     

Cluster 13 of MtC

Total 7 sequences in this cluster
7 in 1 COG and 0 not classified by COG.
Node Degree:       6 = min,       6 = max,       6.00 = avg,       1 connected component.
Most common functional categories in order:
7 [C] METABOLISM : Energy production and conversion

    Connected component # 1/1
  1. MT0155 [C] COG1012 (491) NAD-dependent aldehyde dehydrogenases
  2. MT0474 [C] COG1012 (507) NAD-dependent aldehyde dehydrogenases
  3. MT0233 [C] COG1012 (487) NAD-dependent aldehyde dehydrogenases
  4. MT2926 [C] COG1012 (455) NAD-dependent aldehyde dehydrogenases
  5. MT0245 [C] COG1012 (467) NAD-dependent aldehyde dehydrogenases
  6. MT0792 [C] COG1012 (489) NAD-dependent aldehyde dehydrogenases
  7. MT1772 [C] COG1012 (518) NAD-dependent aldehyde dehydrogenases
    7 nodes with Node Degree:       6 = min,       6 = max,       6.00 = avg
     

Cluster 14 of MtC

Total 57 sequences in this cluster
39 in 6 COG and 18 not classified by COG.
Node Degree:       5 = min,       8 = max,       5.16 = avg,       9 connected components.
Most common functional categories in order:
15 [I] METABOLISM : Lipid transport and metabolism
6 [J] INFORMATION STORAGE AND PROCESSING : Translation, ribosomal structure and biogenesis
6 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair
6 [P] METABOLISM : Inorganic ion transport and metabolism
6 [T] CELLULAR PROCESSES AND SIGNALING : Signal transduction mechanisms

    Connected component # 1/9
  1. MT2956 [J] COG0154 (473) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  2. MT3264 [J] COG0154 (493) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  3. MT1301 [J] COG0154 (462) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  4. MT2432 [J] COG0154 (484) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  5. MT3091 [J] COG0154 (494) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
  6. MT3485 [J] COG0154 (475) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 2/9
  7. MT3721 Not in COG (94)
  8. MT1066 Not in COG (94)
  9. MT1842 Not in COG (94)
  10. MT2411 Not in COG (94)
  11. MT2420 Not in COG (96)
  12. MT1236 Not in COG (94)
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 3/9
  13. MT3057 [L] COG2452 (194) Predicted site-specific integrase-resolvase
  14. MT0948 [L] COG2452 (193) Predicted site-specific integrase-resolvase
  15. MT0633 [L] COG2452 (202) Predicted site-specific integrase-resolvase
  16. MT2954 [L] COG2452 (295) Predicted site-specific integrase-resolvase
  17. MT3936 [L] COG2452 (203) Predicted site-specific integrase-resolvase
  18. MT2862 [L] COG2452 (193) Predicted site-specific integrase-resolvase
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 4/9
  19. MT2085 [T] COG0589 (294) Universal stress protein UspA and related nucleotide-binding proteins
  20. MT2052 [T] COG0589 (317) Universal stress protein UspA and related nucleotide-binding proteins
  21. MT2061 [T] COG0589 (295) Universal stress protein UspA and related nucleotide-binding proteins
  22. MT2698 [T] COG0589 (297) Universal stress protein UspA and related nucleotide-binding proteins
  23. MT3220 [T] COG0589 (268) Universal stress protein UspA and related nucleotide-binding proteins
  24. MT2699 [T] COG0589 (272) Universal stress protein UspA and related nucleotide-binding proteins
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 5/9
  25. MT1438 [P] COG2072 (492) Predicted flavoprotein involved in K+ transport
  26. MT3168 [P] COG2072 (495) Predicted flavoprotein involved in K+ transport
  27. MT0916 [P] COG2072 (495) Predicted flavoprotein involved in K+ transport
  28. MT3134 [P] COG2072 (524) Predicted flavoprotein involved in K+ transport
  29. MT0591 [P] COG2072 (486) Predicted flavoprotein involved in K+ transport
  30. MT3969 [P] COG2072 (489) Predicted flavoprotein involved in K+ transport
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 6/9
  31. MT1365 [I] COG0183 (389) Acetyl-CoA acetyltransferase
  32. MT0882 [I] COG0183 (403) Acetyl-CoA acetyltransferase
  33. MT3650 [I] COG0183 (391) Acetyl-CoA acetyltransferase
  34. MT3660 [I] COG0183 (386) Acetyl-CoA acetyltransferase
  35. MT0257 [I] COG0183 (440) Acetyl-CoA acetyltransferase
  36. MT1104 [I] COG0183 (405) Acetyl-CoA acetyltransferase
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 7/9
  37. MT1623 Not in COG (222)
  38. MT1160 Not in COG (420)
  39. MT3572 Not in COG (222)
  40. MT1183 Not in COG (499)
  41. MT1995 Not in COG (482)
  42. MT1741 Not in COG (454)
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     
    Connected component # 8/9
  43. MT3665 [I] COG1960 (385) Acyl-CoA dehydrogenases
  44. MT3667 [I] COG1960 (377) Acyl-CoA dehydrogenases
  45. MT3668 [I] COG1960 (317) Acyl-CoA dehydrogenases
  46. MT3147 [I] COG1960 (721) Acyl-CoA dehydrogenases
  47. MT3678 [I] COG1960 (711) Acyl-CoA dehydrogenases
  48. MT0284 [I] COG1960 (731) Acyl-CoA dehydrogenases
  49. MT3669 [I] COG1960 (318) Acyl-CoA dehydrogenases
  50. MT1983 [I] COG1960 (363) Acyl-CoA dehydrogenases
  51. MT1984 [I] COG1960 (409) Acyl-CoA dehydrogenases
    9 nodes with Node Degree:       5 = min,       8 = max,       6.00 = avg
     
    Connected component # 9/9
  52. MT1805 Not in COG (174)
  53. MT2358 Not in COG (219)
  54. MT3827 Not in COG (207)
  55. MT3557 Not in COG (247)
  56. MT3559 Not in COG (231)
  57. MT2037 Not in COG (217)
    6 nodes with Node Degree:       5 = min,       5 = max,       5.00 = avg
     

Cluster 15 of MtC

Total 7 sequences in this cluster
7 in 1 COG and 0 not classified by COG.
Node Degree:       5 = min,       6 = max,       5.43 = avg,       1 connected component.
Most common functional categories in order:
7 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism

    Connected component # 1/1
  1. MT0621 [Q] COG1463 (440) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  2. MT0179 [Q] COG1463 (346) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  3. MT2020 [Q] COG1463 (440) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  4. MT3602 [Q] COG1463 (350) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  5. MT0180 [Q] COG1463 (506) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  6. MT2019 [Q] COG1463 (342) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  7. MT3601 [Q] COG1463 (357) ABC-type transport system involved in resistance to organic solvents, periplasmic component
    7 nodes with Node Degree:       5 = min,       6 = max,       5.43 = avg
     

Cluster 16 of MtC

Total 95 sequences in this cluster
80 in 20 COG and 15 not classified by COG.
Node Degree:       4 = min,       6 = max,       4.21 = avg,     18 connected components.
Most common functional categories in order:
17 [T] CELLULAR PROCESSES AND SIGNALING : Signal transduction mechanisms
17 [R] POORLY CHARACTERIZED : General function prediction only
10 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair
9 [C] METABOLISM : Energy production and conversion
7 [I] METABOLISM : Lipid transport and metabolism
6 [D] CELLULAR PROCESSES AND SIGNALING : Cell cycle control, cell division, chromosome partitioning
6 [N] CELLULAR PROCESSES AND SIGNALING : Cell motility
5 [S] POORLY CHARACTERIZED : Function unknown
4 [E] METABOLISM : Amino acid transport and metabolism
2 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
2 [H] METABOLISM : Coenzyme transport and metabolism

    Connected component # 1/18
  1. MT0404 Not in COG (441)
  2. MT0350 Not in COG (503)
  3. MT0536 Not in COG (534)
  4. MT3885 Not in COG (542)
  5. MT2160 Not in COG (551)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 2/18
  6. MT1361 [T] COG2114 (558) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  7. MT1362 [T] COG2114 (567) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  8. MT3748 [T] COG2114 (549) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  9. MT1359 [T] COG2114 (541) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  10. MT1360 [T] COG2114 (532) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 3/18
  11. MT0783 [T] COG0642 (485) Signal transduction histidine kinase
  12. MT0925 [T] COG0642 (469) Signal transduction histidine kinase
  13. MT0509 [T] COG0642 (410) Signal transduction histidine kinase
  14. MT3871 [T] COG0642 (506) Signal transduction histidine kinase
  15. MT3343 [T] COG0642 (567) Signal transduction histidine kinase
  16. MT1061 [T] COG0642 (509) Signal transduction histidine kinase
  17. MT1010 [T] COG0642 (504) Signal transduction histidine kinase
    7 nodes with Node Degree:       4 = min,       6 = max,       5.14 = avg
     
    Connected component # 4/18
  18. MT0171 [C] COG1062 (383) Zn-dependent alcohol dehydrogenases, class III
  19. MT2320 [C] COG1062 (361) Zn-dependent alcohol dehydrogenases, class III
  20. MT0786 [C] COG1062 (342) Zn-dependent alcohol dehydrogenases, class III
  21. MT3171 [C] COG1062 (368) Zn-dependent alcohol dehydrogenases, class III
  22. MT1946 [ER] COG1063 (384) Threonine dehydrogenase and related Zn-dependent dehydrogenases
  23. MT3130 [R] COG1064 (346) Zn-dependent alcohol dehydrogenases
    6 nodes with Node Degree:       4 = min,       5 = max,       4.67 = avg
     
    Connected component # 5/18
  24. MT2861 [L] COG0675 (459) Transposase and inactivated derivatives
  25. MT2953 [L] COG0675 (460) Transposase and inactivated derivatives
  26. MT3056 [L] COG0675 (459) Transposase and inactivated derivatives
  27. MT0949 [L] COG0675 (550) Transposase and inactivated derivatives
  28. MT3935 [L] COG0675 (408) Transposase and inactivated derivatives
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 6/18
  29. MT1402_1 [T] COG2114 (278) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  30. MT2563_1 [T] COG2114 (226) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  31. MT1403 [T] COG2114 (253) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  32. MT0399_1 [T] COG2114 (212) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
  33. MT0915 [T] COG2114 (285) Adenylate cyclase, family 3 (some proteins contain HAMP domain)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 7/18
  34. MT3722 Not in COG (98)
  35. MT1067 Not in COG (108)
  36. MT2412 Not in COG (98)
  37. MT2421 Not in COG (99)
  38. MT1235 Not in COG (98)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 8/18
  39. MT2939 [R] COG1848 (147) Predicted nucleic acid-binding protein, contains PIN domain
  40. MT2163 [R] COG1848 (145) Predicted nucleic acid-binding protein, contains PIN domain
  41. MT0289 [R] COG1848 (142) Predicted nucleic acid-binding protein, contains PIN domain
  42. MT1280 [R] COG1848 (143) Predicted nucleic acid-binding protein, contains PIN domain
  43. MT0773 [R] COG1848 (142) Predicted nucleic acid-binding protein, contains PIN domain
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 9/18
  44. MT2666 [E] COG0160 (449) 4-aminobutyrate aminotransferase and related aminotransferases
  45. MT3389 [E] COG0160 (449) 4-aminobutyrate aminotransferase and related aminotransferases
  46. MT3432 [H] COG0161 (466) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
  47. MT1619 [H] COG0161 (437) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
  48. MT1693 [E] COG4992 (400) Ornithine/acetylornithine aminotransferase
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 10/18
  49. MT0297 [D] COG1674 (1330) DNA segregation ATPase FtsK/SpoIIIE and related proteins
  50. MT3983 [D] COG1674 (747) DNA segregation ATPase FtsK/SpoIIIE and related proteins
  51. MT3985 [D] COG1674 (591) DNA segregation ATPase FtsK/SpoIIIE and related proteins
  52. MT1833 [D] COG1674 (1391) DNA segregation ATPase FtsK/SpoIIIE and related proteins
  53. MT3553 [D] COG1674 (1200) DNA segregation ATPase FtsK/SpoIIIE and related proteins
  54. MT4010 [D] COG1674 (1396) DNA segregation ATPase FtsK/SpoIIIE and related proteins
    6 nodes with Node Degree:       4 = min,       5 = max,       4.67 = avg
     
    Connected component # 11/18
  55. MT1832 Not in COG (506)
  56. MT3982 Not in COG (480)
  57. MT3556 Not in COG (482)
  58. MT4011 Not in COG (495)
  59. MT0296 Not in COG (538)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 12/18
  60. MT2922 [C] COG1249 (459) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
  61. MT0817_1 [C] COG1249 (418) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
  62. MT3402 [C] COG1249 (471) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
  63. MT2786 [C] COG1249 (468) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
  64. MT0478 [C] COG1249 (464) Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 13/18
  65. MT2182.1 [N] COG5651 (150) PPE-repeat proteins
  66. MT3106 [N] COG5651 (435) PPE-repeat proteins
  67. MT0292 [N] COG5651 (575) PPE-repeat proteins
  68. MT0299 [N] COG5651 (513) PPE-repeat proteins
  69. MT3987 [N] COG5651 (371) PPE-repeat proteins
  70. MT0105 [N] COG5651 (463) PPE-repeat proteins
    6 nodes with Node Degree:       4 = min,       5 = max,       4.67 = avg
     
    Connected component # 14/18
  71. MT3534 [L] COG2801 (387) Transposase and inactivated derivatives
  72. MT1803 [L] COG2801 (294) Transposase and inactivated derivatives
  73. MT2881 [L] COG2801 (294) Transposase and inactivated derivatives
  74. MT0413 [L] COG2801 (294) Transposase and inactivated derivatives
  75. MT3100 [L] COG2801 (294) Transposase and inactivated derivatives
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 15/18
  76. MT2594 [S] COG1376 (408) Uncharacterized protein conserved in bacteria
  77. MT0202 [S] COG1376 (366) Uncharacterized protein conserved in bacteria
  78. MT0501 [S] COG1376 (451) Uncharacterized protein conserved in bacteria
  79. MT1477 [S] COG1376 (271) Uncharacterized protein conserved in bacteria
  80. MT0125 [S] COG1376 (210) Uncharacterized protein conserved in bacteria
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 16/18
  81. MT1402_2 [R] COG3903 (671) Predicted ATPase
  82. MT0914_1 [R] COG3903 (670) Predicted ATPase
  83. MT0399_2 [R] COG3903 (671) Predicted ATPase
  84. MT2563_2 [R] COG3903 (669) Predicted ATPase
  85. MT0918 [R] COG3903 (393) Predicted ATPase
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 17/18
  86. MT3379.1 [I] COG4799 (548) Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
  87. MT3906 [I] COG4799 (522) Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
  88. MT2307 [I] COG4799 (473) Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
  89. MT1002 [I] COG4799 (531) Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
  90. MT2577 [I] COG4799 (529) Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     
    Connected component # 18/18
  91. MT2584 [R] COG0300 (268) Short-chain dehydrogenases of various substrate specificities
  92. MT1596 [R] COG0300 (267) Short-chain dehydrogenases of various substrate specificities
  93. MT0789 [IQR] COG1028 (275) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  94. MT0971 [IQR] COG1028 (253) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  95. MT0502 [R] COG4221 (251) Short-chain alcohol dehydrogenase of unknown specificity
    5 nodes with Node Degree:       4 = min,       4 = max,       4.00 = avg
     

Cluster 17 of MtC

Total 179 sequences in this cluster
166 in 41 COG and 13 not classified by COG.
Node Degree:       3 = min,       6 = max,       3.20 = avg,     41 connected components.
Most common functional categories in order:
35 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
29 [R] POORLY CHARACTERIZED : General function prediction only
28 [I] METABOLISM : Lipid transport and metabolism
19 [C] METABOLISM : Energy production and conversion
16 [E] METABOLISM : Amino acid transport and metabolism
10 [H] METABOLISM : Coenzyme transport and metabolism
9 [O] CELLULAR PROCESSES AND SIGNALING : Posttranslational modification, protein turnover, chaperones
9 [V] CELLULAR PROCESSES AND SIGNALING : Defense mechanisms
8 [G] METABOLISM : Carbohydrate transport and metabolism
7 [P] METABOLISM : Inorganic ion transport and metabolism
5 [D] CELLULAR PROCESSES AND SIGNALING : Cell cycle control, cell division, chromosome partitioning
4 [M] CELLULAR PROCESSES AND SIGNALING : Cell wall/membrane/envelope biogenesis
4 [K] INFORMATION STORAGE AND PROCESSING : Transcription
4 [S] POORLY CHARACTERIZED : Function unknown
4 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair

    Connected component # 1/41
  1. MT0980 [C] COG2141 (304) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  2. MT3164 [C] COG2141 (275) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  3. MT2219 [C] COG2141 (288) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  4. MT0967 [C] COG2141 (288) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 2/41
  5. MT2860 [I] COG0183 (400) Acetyl-CoA acetyltransferase
  6. MT0939 [I] COG0183 (412) Acetyl-CoA acetyltransferase
  7. MT1663 [I] COG0183 (402) Acetyl-CoA acetyltransferase
  8. MT3623 [I] COG0183 (394) Acetyl-CoA acetyltransferase
  9. MT3644 [I] COG0183 (386) Acetyl-CoA acetyltransferase
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 3/41
  10. MT0176 [Q] COG0767 (265) ABC-type transport system involved in resistance to organic solvents, permease component
  11. MT2016 [Q] COG0767 (265) ABC-type transport system involved in resistance to organic solvents, permease component
  12. MT0616 [Q] COG0767 (265) ABC-type transport system involved in resistance to organic solvents, permease component
  13. MT3605 [Q] COG0767 (237) ABC-type transport system involved in resistance to organic solvents, permease component
  14. MT0617 [Q] COG0767 (295) ABC-type transport system involved in resistance to organic solvents, permease component
  15. MT2017 [Q] COG0767 (271) ABC-type transport system involved in resistance to organic solvents, permease component
  16. MT3604 [Q] COG0767 (280) ABC-type transport system involved in resistance to organic solvents, permease component
    7 nodes with Node Degree:       3 = min,       6 = max,       3.71 = avg
     
    Connected component # 4/41
  17. MT0178 [Q] COG1463 (527) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  18. MT2018 [Q] COG1463 (425) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  19. MT0618 [Q] COG1463 (404) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  20. MT3603 [Q] COG1463 (400) ABC-type transport system involved in resistance to organic solvents, periplasmic component
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 5/41
  21. MT2379 [G] COG1175 (290) ABC-type sugar transport systems, permease components
  22. MT1274 [G] COG1175 (307) ABC-type sugar transport systems, permease components
  23. MT2100 [G] COG1175 (300) ABC-type sugar transport systems, permease components
  24. MT2901 [G] COG1175 (303) ABC-type sugar transport systems, permease components
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 6/41
  25. MT2380 [G] COG0395 (274) ABC-type sugar transport system, permease component
  26. MT1275 [G] COG0395 (274) ABC-type sugar transport system, permease component
  27. MT2900 [G] COG0395 (275) ABC-type sugar transport system, permease component
  28. MT2099 [G] COG0395 (280) ABC-type sugar transport system, permease component
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 7/41
  29. MT1001_1 [I] COG0439 (448) Biotin carboxylase
  30. MT3045 [C] COG1038 (1127) Pyruvate carboxylase
  31. MT2576 [I] COG4770 (654) Acetyl/propionyl-CoA carboxylase, alpha subunit
  32. MT3384 [I] COG4770 (600) Acetyl/propionyl-CoA carboxylase, alpha subunit
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 8/41
  33. MT0316 [IQR] COG1028 (302) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  34. MT0074 [IQR] COG1028 (303) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  35. MT2323 [IQR] COG1028 (317) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  36. MT0455 [IQR] COG1028 (338) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 9/41
  37. MT2453 [I] COG0657 (327) Esterase/lipase
  38. MT1106 [I] COG0657 (358) Esterase/lipase
  39. MT3591 [I] COG0657 (327) Esterase/lipase
  40. MT1443 [I] COG0657 (319) Esterase/lipase
  41. MT3169 [I] COG0657 (308) Esterase/lipase
  42. MT1444 [I] COG0657 (320) Esterase/lipase
  43. MT0227 [I] COG0657 (273) Esterase/lipase
  44. MT3048 [I] COG0657 (309) Esterase/lipase
    8 nodes with Node Degree:       3 = min,       5 = max,       4.00 = avg
     
    Connected component # 10/41
  45. MT0622 [Q] COG1463 (508) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  46. MT0181 [Q] COG1463 (530) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  47. MT2021 [Q] COG1463 (423) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  48. MT3600 [Q] COG1463 (450) ABC-type transport system involved in resistance to organic solvents, periplasmic component
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 11/41
  49. MT0623 [Q] COG1463 (402) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  50. MT0182 [Q] COG1463 (389) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  51. MT2022 [Q] COG1463 (377) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  52. MT3599 [Q] COG1463 (384) ABC-type transport system involved in resistance to organic solvents, periplasmic component
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 12/41
  53. MT0624 [Q] COG1463 (539) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  54. MT0183 [Q] COG1463 (515) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  55. MT2023 [Q] COG1463 (437) ABC-type transport system involved in resistance to organic solvents, periplasmic component
  56. MT3598 [Q] COG1463 (564) ABC-type transport system involved in resistance to organic solvents, periplasmic component
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 13/41
  57. MT3998 [O] COG1404 (411) Subtilisin-like serine proteases
  58. MT1845 [O] COG1404 (585) Subtilisin-like serine proteases
  59. MT3555 [O] COG1404 (455) Subtilisin-like serine proteases
  60. MT0304 [O] COG1404 (414) Subtilisin-like serine proteases
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 14/41
  61. MT2229 [H] COG0142 (352) Geranylgeranyl pyrophosphate synthase
  62. MT3491 [H] COG0142 (354) Geranylgeranyl pyrophosphate synthase
  63. MT3506 [H] COG0142 (359) Geranylgeranyl pyrophosphate synthase
  64. MT1018 [H] COG0142 (333) Geranylgeranyl pyrophosphate synthase
  65. MT0588 [H] COG0142 (335) Geranylgeranyl pyrophosphate synthase
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 15/41
  66. MT2278 [E] COG0174 (478) Glutamine synthetase
  67. MT2280 [E] COG0174 (446) Glutamine synthetase
  68. MT1927 [E] COG0174 (450) Glutamine synthetase
  69. MT2928 [E] COG0174 (457) Glutamine synthetase
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 16/41
  70. MT3831_3 [R] COG1752 (414) Predicted esterase of the alpha-beta hydrolase superfamily
  71. MT3337_3 [R] COG1752 (404) Predicted esterase of the alpha-beta hydrolase superfamily
  72. MT1093 [R] COG1752 (360) Predicted esterase of the alpha-beta hydrolase superfamily
  73. MT2641_2 [R] COG1752 (420) Predicted esterase of the alpha-beta hydrolase superfamily
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 17/41
  74. MT3990 [D] COG0455 (666) ATPases involved in chromosome partitioning
  75. MT3975 [D] COG0455 (390) ATPases involved in chromosome partitioning
  76. MT2857_2 [D] COG0455 (312) ATPases involved in chromosome partitioning
  77. MT4003 [D] COG0455 (341) ATPases involved in chromosome partitioning
  78. MT0552 [D] COG0455 (405) ATPases involved in chromosome partitioning
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 18/41
  79. MT0706 Not in COG (142)
  80. MT0415 Not in COG (151)
  81. MT0527 Not in COG (145)
  82. MT0467 Not in COG (140)
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 19/41
  83. MT3228 [CR] COG0604 (323) NADPH:quinone reductase and related Zn-dependent oxidoreductases
  84. MT0157 [CR] COG0604 (322) NADPH:quinone reductase and related Zn-dependent oxidoreductases
  85. MT3886 [CR] COG0604 (328) NADPH:quinone reductase and related Zn-dependent oxidoreductases
  86. MT1963 [CR] COG0604 (334) NADPH:quinone reductase and related Zn-dependent oxidoreductases
  87. MT1501 [CR] COG0604 (335) NADPH:quinone reductase and related Zn-dependent oxidoreductases
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 20/41
  88. MT2458 Not in COG (154)
  89. MT0890 Not in COG (407)
  90. MT1038_2 Not in COG (91)
  91. MT1932 Not in COG (188)
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 21/41
  92. MT1469 [I] COG0657 (471) Esterase/lipase
  93. MT0230 [I] COG0657 (403) Esterase/lipase
  94. MT2559 [I] COG0657 (421) Esterase/lipase
  95. MT2342 [I] COG0657 (431) Esterase/lipase
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 22/41
  96. MT3981_2 [O] COG0464 (280) ATPases of the AAA+ class
  97. MT3999_2 [O] COG0464 (287) ATPases of the AAA+ class
  98. MT1847_2 [O] COG0464 (323) ATPases of the AAA+ class
  99. MT0295_2 [O] COG0464 (287) ATPases of the AAA+ class
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 23/41
  100. MT1631 [H] COG0029 (527) Aspartate oxidase
  101. MT1603 [C] COG1053 (583) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
  102. MT3419 [C] COG1053 (590) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
  103. MT0262 [C] COG1053 (646) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 24/41
  104. MT2414 [M] COG3511 (508) Phospholipase C
  105. MT2415 [M] COG3511 (512) Phospholipase C
  106. MT2416 [M] COG3511 (520) Phospholipase C
  107. MT1799 [M] COG3511 (514) Phospholipase C
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 25/41
  108. MT0414 [L] COG2963 (108) Transposase and inactivated derivatives
  109. MT1804 [L] COG2963 (108) Transposase and inactivated derivatives
  110. MT3099 [L] COG2963 (108) Transposase and inactivated derivatives
  111. MT2882 [L] COG2963 (108) Transposase and inactivated derivatives
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 26/41
  112. MT0586 [QR] COG0500 (241) SAM-dependent methyltransferases
  113. MT3802 [QR] COG0500 (236) SAM-dependent methyltransferases
  114. MT2749 [QR] COG0500 (250) SAM-dependent methyltransferases
  115. MT1421 [QR] COG0500 (226) SAM-dependent methyltransferases
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 27/41
  116. MT0090 [CP] COG0651 (640) Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
  117. MT0093 [CP] COG0651 (488) Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
  118. MT3246 [C] COG1007 (531) NADH:ubiquinone oxidoreductase subunit 2 (chain N)
  119. MT3245 [C] COG1008 (554) NADH:ubiquinone oxidoreductase subunit 4 (chain M)
  120. MT3244 [CP] COG1009 (633) NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 28/41
  121. MT2397 [E] COG0031 (310) Cysteine synthase
  122. MT1108_1 [E] COG0031 (334) Cysteine synthase
  123. MT1377 [E] COG0031 (323) Cysteine synthase
  124. MT3786 [E] COG0031 (368) Cysteine synthase
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 29/41
  125. MT1103 Not in COG (286)
  126. MT2308 Not in COG (271)
  127. MT3817 Not in COG (341)
  128. MT3618 Not in COG (213)
  129. MT1529 Not in COG (292)
    5 nodes with Node Degree:       3 = min,       4 = max,       3.60 = avg
     
    Connected component # 30/41
  130. MT3576 [EH] COG0028 (542) Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
  131. MT3083 [EH] COG0028 (618) Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
  132. MT0126 [EH] COG0028 (582) Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
  133. MT1868 [EH] COG0028 (547) Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 31/41
  134. MT0646 [R] COG1848 (133) Predicted nucleic acid-binding protein, contains PIN domain
  135. MT3421 [R] COG1848 (142) Predicted nucleic acid-binding protein, contains PIN domain
  136. MT2569 [R] COG1848 (141) Predicted nucleic acid-binding protein, contains PIN domain
  137. MT2605 [R] COG1848 (139) Predicted nucleic acid-binding protein, contains PIN domain
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 32/41
  138. MT1402_3 [K] COG2771 (210) DNA-binding HTH domain-containing proteins
  139. MT2563_3 [K] COG2771 (218) DNA-binding HTH domain-containing proteins
  140. MT0399_3 [K] COG2771 (209) DNA-binding HTH domain-containing proteins
  141. MT0914_2 [K] COG2771 (212) DNA-binding HTH domain-containing proteins
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 33/41
  142. MT0544 [E] COG1113 (434) Gamma-aminobutyrate permease and related permeases
  143. MT2186 [E] COG1113 (462) Gamma-aminobutyrate permease and related permeases
  144. MT1744 [E] COG1113 (556) Gamma-aminobutyrate permease and related permeases
  145. MT0361 [E] COG1113 (487) Gamma-aminobutyrate permease and related permeases
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 34/41
  146. MT1311 [V] COG1132 (582) ABC-type multidrug transport system, ATPase and permease components
  147. MT1390_2 [V] COG1132 (479) ABC-type multidrug transport system, ATPase and permease components
  148. MT1392 [V] COG1132 (579) ABC-type multidrug transport system, ATPase and permease components
  149. MT0204 [V] COG1132 (1241) ABC-type multidrug transport system, ATPase and permease components
  150. MT1310 [V] COG1132 (631) ABC-type multidrug transport system, ATPase and permease components
  151. MT1657 [CO] COG4988 (527) ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
    6 nodes with Node Degree:       3 = min,       5 = max,       3.67 = avg
     
    Connected component # 35/41
  152. MT3199 [P] COG2897 (277) Rhodanese-related sulfurtransferase
  153. MT0837 [P] COG2897 (277) Rhodanese-related sulfurtransferase
  154. MT3382 [P] COG2897 (297) Rhodanese-related sulfurtransferase
  155. MT2348 [P] COG2897 (268) Rhodanese-related sulfurtransferase
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 36/41
  156. MT0110_2 [Q] COG1020 (565) Non-ribosomal peptide synthetase modules and related proteins
  157. MT2451_2 [Q] COG1020 (1110) Non-ribosomal peptide synthetase modules and related proteins
  158. MT0110_3 [Q] COG1020 (1091) Non-ribosomal peptide synthetase modules and related proteins
  159. MT2448_1 [Q] COG1020 (1128) Non-ribosomal peptide synthetase modules and related proteins
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 37/41
  160. MT3910 [R] COG0627 (310) Predicted esterase
  161. MT3911 [R] COG0627 (355) Predicted esterase
  162. MT0137 [R] COG0627 (346) Predicted esterase
  163. MT1934 [R] COG0627 (374) Predicted esterase
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 38/41
  164. MT0652 [S] COG3742 (131) Uncharacterized protein conserved in bacteria
  165. MT2034 [S] COG3742 (139) Uncharacterized protein conserved in bacteria
  166. MT0638 [S] COG3742 (133) Uncharacterized protein conserved in bacteria
  167. MT2829 [S] COG3742 (131) Uncharacterized protein conserved in bacteria
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 39/41
  168. MT1988 [R] COG0596 (356) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  169. MT3771 [R] COG0596 (327) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  170. MT3719 [R] COG0596 (322) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  171. MT0142 [R] COG0596 (300) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 40/41
  172. MT1514 [I] COG1960 (609) Acyl-CoA dehydrogenases
  173. MT0258 [I] COG1960 (611) Acyl-CoA dehydrogenases
  174. MT3904 [I] COG1960 (593) Acyl-CoA dehydrogenases
  175. MT0701 [I] COG1960 (542) Acyl-CoA dehydrogenases
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     
    Connected component # 41/41
  176. MT3884 [V] COG1680 (415) Beta-lactamase class C and other penicillin binding proteins
  177. MT1545 [V] COG1680 (428) Beta-lactamase class C and other penicillin binding proteins
  178. MT1974 [V] COG1680 (426) Beta-lactamase class C and other penicillin binding proteins
  179. MT2538 [V] COG1680 (394) Beta-lactamase class C and other penicillin binding proteins
    4 nodes with Node Degree:       3 = min,       3 = max,       3.00 = avg
     

Cluster 18 of MtC

Total 20 sequences in this cluster
10 in 2 COG and 10 not classified by COG.
Node Degree:       3 = min,       9 = max,       3.70 = avg,       3 connected components.
Most common functional categories in order:
5 [C] METABOLISM : Energy production and conversion
5 [I] METABOLISM : Lipid transport and metabolism
5 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
5 [R] POORLY CHARACTERIZED : General function prediction only

    Connected component # 1/3
  1. MT0772.1 Not in COG (783)
  2. MT2404 Not in COG (413)
  3. MT0311 Not in COG (622)
  4. MT2390 Not in COG (417)
  5. MT3920 Not in COG (504)
  6. MT3581 Not in COG (98)
  7. MT1209 Not in COG (308)
  8. MT3181_1 Not in COG (152)
  9. MT3612 Not in COG (1384)
  10. MT1474 Not in COG (528)
    10 nodes with Node Degree:       3 = min,       9 = max,       4.20 = avg
     
    Connected component # 2/3
  11. MT3589 [IQR] COG1028 (293) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  12. MT3653 [IQR] COG1028 (259) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  13. MT1530 [IQR] COG1028 (247) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  14. MT2836 [IQR] COG1028 (260) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  15. MT0954 [IQR] COG1028 (263) Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
    5 nodes with Node Degree:       3 = min,       4 = max,       3.20 = avg
     
    Connected component # 3/3
  16. MT0816 [C] COG2141 (347) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  17. MT2961 [C] COG2141 (325) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  18. MT0140 [C] COG2141 (360) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  19. MT1903 [C] COG2141 (307) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
  20. MT0420 [C] COG2141 (336) Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
    5 nodes with Node Degree:       3 = min,       4 = max,       3.20 = avg
     

Cluster 19 of MtC

Total 221 sequences in this cluster
187 in 69 COG and 34 not classified by COG.
Node Degree:       2 = min,       5 = max,       2.13 = avg,     69 connected components.
Most common functional categories in order:
32 [R] POORLY CHARACTERIZED : General function prediction only
26 [C] METABOLISM : Energy production and conversion
17 [P] METABOLISM : Inorganic ion transport and metabolism
15 [E] METABOLISM : Amino acid transport and metabolism
13 [H] METABOLISM : Coenzyme transport and metabolism
13 [M] CELLULAR PROCESSES AND SIGNALING : Cell wall/membrane/envelope biogenesis
12 [K] INFORMATION STORAGE AND PROCESSING : Transcription
12 [I] METABOLISM : Lipid transport and metabolism
11 [T] CELLULAR PROCESSES AND SIGNALING : Signal transduction mechanisms
11 [Q] METABOLISM : Secondary metabolites biosynthesis, transport and catabolism
9 [L] INFORMATION STORAGE AND PROCESSING : Replication, recombination and repair
7 [O] CELLULAR PROCESSES AND SIGNALING : Posttranslational modification, protein turnover, chaperones
7 [G] METABOLISM : Carbohydrate transport and metabolism
7 [V] CELLULAR PROCESSES AND SIGNALING : Defense mechanisms
3 [S] POORLY CHARACTERIZED : Function unknown
3 [D] CELLULAR PROCESSES AND SIGNALING : Cell cycle control, cell division, chromosome partitioning
1 [J] INFORMATION STORAGE AND PROCESSING : Translation, ribosomal structure and biogenesis

    Connected component # 1/69
  1. MT3253 [R] COG0714 (320) MoxR-like ATPases
  2. MT3794 [R] COG0714 (358) MoxR-like ATPases
  3. MT1526 [R] COG0714 (377) MoxR-like ATPases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 2/69
  4. MT2055 [E] COG0531 (440) Amino acid transporters
  5. MT2383 [E] COG0531 (471) Amino acid transporters
  6. MT3351 [E] COG0531 (495) Amino acid transporters
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 3/69
  7. MT0402 [E] COG0626 (406) Cystathionine beta-lyases/cystathionine gamma-synthases
  8. MT1110 [E] COG0626 (388) Cystathionine beta-lyases/cystathionine gamma-synthases
  9. MT3443 [E] COG2873 (449) O-acetylhomoserine sulfhydrylase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 4/69
  10. MT1299 Not in COG (149)
  11. MT3267 Not in COG (171)
  12. MT1609 Not in COG (148)
  13. MT3651 Not in COG (151)
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 5/69
  14. MT2658 [R] COG0491 (246) Zn-dependent hydrolases, including glyoxylases
  15. MT0662 [R] COG0491 (237) Zn-dependent hydrolases, including glyoxylases
  16. MT2321 [R] COG0491 (212) Zn-dependent hydrolases, including glyoxylases
  17. MT1673 [R] COG0491 (264) Zn-dependent hydrolases, including glyoxylases
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 6/69
  18. MT2098 [G] COG3839 (357) ABC-type sugar transport systems, ATPase components
  19. MT1276 [G] COG3839 (393) ABC-type sugar transport systems, ATPase components
  20. MT2898 [G] COG3839 (360) ABC-type sugar transport systems, ATPase components
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 7/69
  21. MT3841 [K] COG2207 (353) AraC-type DNA-binding domain-containing proteins
  22. MT1440 [K] COG2207 (344) AraC-type DNA-binding domain-containing proteins
  23. MT3167 [K] COG2207 (352) AraC-type DNA-binding domain-containing proteins
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 8/69
  24. MT1902 [C] COG1252 (463) NADH dehydrogenase, FAD-containing subunit
  25. MT0403 [C] COG1252 (470) NADH dehydrogenase, FAD-containing subunit
  26. MT1860 [C] COG1252 (397) NADH dehydrogenase, FAD-containing subunit
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 9/69
  27. MT3212 Not in COG (348)
  28. MT3217 Not in COG (344)
  29. MT2091 Not in COG (333)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 10/69
  30. MT3393 [R] COG1373 (269) Predicted ATPase (AAA+ superfamily)
  31. MT0627 [R] COG1373 (411) Predicted ATPase (AAA+ superfamily)
  32. MT3270 [R] COG1373 (454) Predicted ATPase (AAA+ superfamily)
  33. MT2064 [R] COG1373 (452) Predicted ATPase (AAA+ superfamily)
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 11/69
  34. MT2618 Not in COG (219)
  35. MT2619 Not in COG (219)
  36. MT2620 Not in COG (220)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 12/69
  37. MT3291 [L] COG0210 (700) Superfamily I DNA and RNA helicases
  38. MT0976 [L] COG0210 (771) Superfamily I DNA and RNA helicases
  39. MT3295_1 [L] COG0210 (821) Superfamily I DNA and RNA helicases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 13/69
  40. MT1505 [V] COG1131 (313) ABC-type multidrug transport system, ATPase component
  41. MT1256 [V] COG1131 (311) ABC-type multidrug transport system, ATPase component
  42. MT3006 [V] COG1131 (331) ABC-type multidrug transport system, ATPase component
  43. MT2762 [V] COG1131 (317) ABC-type multidrug transport system, ATPase component
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 14/69
  44. MT3097 [S] COG4842 (121) Uncharacterized protein conserved in bacteria
  45. MT3104 [S] COG4842 (96) Uncharacterized protein conserved in bacteria
  46. MT0301 [S] COG4842 (96) Uncharacterized protein conserved in bacteria
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 15/69
  47. MT3588 [K] COG1316 (513) Transcriptional regulator
  48. MT3367 [K] COG1316 (497) Transcriptional regulator
  49. MT0844 [K] COG1316 (684) Transcriptional regulator
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 16/69
  50. MT1415 Not in COG (261)
  51. MT1308 Not in COG (244)
  52. MT3017 Not in COG (233)
  53. MT1455 Not in COG (239)
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 17/69
  54. MT2202 [R] COG1926 (352) Predicted phosphoribosyltransferases
  55. MT2089_1 [R] COG1926 (222) Predicted phosphoribosyltransferases
  56. MT0597 [R] COG1926 (451) Predicted phosphoribosyltransferases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 18/69
  57. MT0239 [R] COG1487 (226) Predicted nucleic acid-binding protein, contains PIN domain
  58. MT2827 [R] COG1487 (138) Predicted nucleic acid-binding protein, contains PIN domain
  59. MT2622 [R] COG1487 (138) Predicted nucleic acid-binding protein, contains PIN domain
  60. MT0314 [R] COG1487 (141) Predicted nucleic acid-binding protein, contains PIN domain
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 19/69
  61. MT1617 [M] COG0791 (249) Cell wall-associated hydrolases (invasion-associated proteins)
  62. MT1524 [M] COG0791 (275) Cell wall-associated hydrolases (invasion-associated proteins)
  63. MT1525 [M] COG0791 (241) Cell wall-associated hydrolases (invasion-associated proteins)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 20/69
  64. MT2454 [EH] COG0147 (450) Anthranilate/para-aminobenzoate synthases component I
  65. MT1644 [EH] COG0147 (516) Anthranilate/para-aminobenzoate synthases component I
  66. MT1034 [EH] COG0147 (547) Anthranilate/para-aminobenzoate synthases component I
  67. MT3311 [HQ] COG1169 (372) Isochorismate synthase
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 21/69
  68. MT0024 [R] COG2070 (322) Dioxygenases related to 2-nitropropane dioxygenase
  69. MT1944 [R] COG2070 (376) Dioxygenases related to 2-nitropropane dioxygenase
  70. MT3657 [R] COG2070 (360) Dioxygenases related to 2-nitropropane dioxygenase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 22/69
  71. MT1411 [T] COG1366 (128) Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  72. MT2716 [T] COG1366 (148) Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  73. MT1955 [T] COG1366 (144) Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 23/69
  74. MT3981_1 Not in COG (293)
  75. MT3999_1 Not in COG (337)
  76. MT0295_1 Not in COG (326)
  77. MT1847_1 Not in COG (287)
  78. MT2857_1 Not in COG (278)
    5 nodes with Node Degree:       2 = min,       4 = max,       2.80 = avg
     
    Connected component # 24/69
  79. MT3208 [T] COG3629 (311) DNA-binding transcriptional activator of the SARP family
  80. MT3428_1 [T] COG3629 (295) DNA-binding transcriptional activator of the SARP family
  81. MT1305_1 [T] COG3629 (302) DNA-binding transcriptional activator of the SARP family
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 25/69
  82. MT1698 [Q] COG3424 (353) Predicted naringenin-chalcone synthase
  83. MT1417 [Q] COG3424 (393) Predicted naringenin-chalcone synthase
  84. MT1705 [Q] COG3424 (353) Predicted naringenin-chalcone synthase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 26/69
  85. MT0472 [I] COG1024 (304) Enoyl-CoA hydratase/carnithine racemase
  86. MT0702 [I] COG1024 (312) Enoyl-CoA hydratase/carnithine racemase
  87. MT1985 [I] COG1024 (318) Enoyl-CoA hydratase/carnithine racemase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 27/69
  88. MT1837 Not in COG (99)
  89. MT1840 Not in COG (105)
  90. MT1206 Not in COG (106)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 28/69
  91. MT0103 Not in COG (287)
  92. MT3572.1 Not in COG (333)
  93. MT1622.1 Not in COG (240)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 29/69
  94. MT3676 [C] COG1018 (358) Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
  95. MT2846 [C] COG1018 (363) Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
  96. MT3658_2 [C] COG1018 (360) Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
  97. MT3327 [C] COG1018 (380) Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 30/69
  98. MT1989 [R] COG1853 (171) Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
  99. MT0259 [R] COG1853 (162) Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
  100. MT3672 [R] COG1853 (187) Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 31/69
  101. MT1881 [R] COG0596 (286) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  102. MT2353 [R] COG0596 (300) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  103. MT2656 [R] COG0596 (300) Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 32/69
  104. MT1500 [TQ] COG2508 (432) Regulator of polyketide synthase expression
  105. MT1231 [TQ] COG2508 (421) Regulator of polyketide synthase expression
  106. MT2439 [TQ] COG2508 (437) Regulator of polyketide synthase expression
  107. MT1472 [TQ] COG2508 (422) Regulator of polyketide synthase expression
    4 nodes with Node Degree:       2 = min,       3 = max,       2.50 = avg
     
    Connected component # 33/69
  108. MT3190 [C] COG0277 (527) FAD/FMN-containing dehydrogenases
  109. MT2338 [C] COG0277 (459) FAD/FMN-containing dehydrogenases
  110. MT2311 [C] COG0277 (529) FAD/FMN-containing dehydrogenases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 34/69
  111. MT0484 [I] COG1250 (286) 3-hydroxyacyl-CoA dehydrogenase
  112. MT1754 [I] COG1250 (304) 3-hydroxyacyl-CoA dehydrogenase
  113. MT0883_2 [I] COG1250 (405) 3-hydroxyacyl-CoA dehydrogenase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 35/69
  114. MT3398 [P] COG3119 (992) Arylsulfatase A and related enzymes
  115. MT0738 [P] COG3119 (757) Arylsulfatase A and related enzymes
  116. MT0692 [P] COG3119 (787) Arylsulfatase A and related enzymes
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 36/69
  117. MT2470 [O] COG0555 (283) ABC-type sulfate transport system, permease component
  118. MT1906 [P] COG4149 (245) ABC-type molybdate transport system, permease component
  119. MT2469 [P] COG4208 (272) ABC-type sulfate transport system, permease component
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 37/69
  120. MT0712 [J] COG0480 (701) Translation elongation factors (GTPases)
  121. MT2476 [M] COG0481 (653) Membrane GTPase LepA
  122. MT1202 [T] COG1217 (628) Predicted membrane GTPase involved in stress response
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 38/69
  123. MT0716 [R] COG0446 (406) Uncharacterized NAD(FAD)-dependent dehydrogenases
  124. MT1918 [R] COG0446 (411) Uncharacterized NAD(FAD)-dependent dehydrogenases
  125. MT0266 [C] COG1251 (853) NAD(P)H-nitrite reductase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 39/69
  126. MT2667_1 [I] COG1022 (759) Long-chain acyl-CoA synthetases (AMP-forming)
  127. MT2242 [I] COG1022 (603) Long-chain acyl-CoA synthetases (AMP-forming)
  128. MT1600 [I] COG1022 (571) Long-chain acyl-CoA synthetases (AMP-forming)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 40/69
  129. MT0440 [P] COG0474 (1539) Cation transport ATPase
  130. MT2053 [P] COG0474 (901) Cation transport ATPase
  131. MT0116 [P] COG0474 (1625) Cation transport ATPase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 41/69
  132. MT0877 Not in COG (147)
  133. MT0879 Not in COG (144)
  134. MT0880 Not in COG (157)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 42/69
  135. MT1176 [C] COG1804 (395) Predicted acyl-CoA transferases/carnitine dehydratase
  136. MT0878 [C] COG1804 (359) Predicted acyl-CoA transferases/carnitine dehydratase
  137. MT3372 [C] COG1804 (394) Predicted acyl-CoA transferases/carnitine dehydratase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 43/69
  138. MT3420 [C] COG0479 (263) Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
  139. MT0261 [C] COG0479 (248) Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
  140. MT1604 [C] COG0479 (247) Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 44/69
  141. MT3893_1 [MG] COG0451 (355) Nucleoside-diphosphate-sugar epimerases
  142. MT1137 [MG] COG0451 (370) Nucleoside-diphosphate-sugar epimerases
  143. MT3736 [MG] COG0451 (322) Nucleoside-diphosphate-sugar epimerases
  144. MT0121 [MG] COG0451 (318) Nucleoside-diphosphate-sugar epimerases
  145. MT3570 [M] COG1088 (331) dTDP-D-glucose 4,6-dehydratase
  146. MT1561 [M] COG1089 (348) GDP-D-mannose dehydratase
    6 nodes with Node Degree:       2 = min,       5 = max,       3.00 = avg
     
    Connected component # 45/69
  147. MT1259 [K] COG1595 (257) DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
  148. MT3320 [K] COG1595 (284) DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
  149. MT4030 [K] COG1595 (196) DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 46/69
  150. MT3309 [D] COG1192 (266) ATPases involved in chromosome partitioning
  151. MT4037 [D] COG1192 (381) ATPases involved in chromosome partitioning
  152. MT1749 [D] COG1192 (250) ATPases involved in chromosome partitioning
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 47/69
  153. MT3194 [H] COG0315 (170) Molybdenum cofactor biosynthesis enzyme
  154. MT3425 [H] COG0315 (184) Molybdenum cofactor biosynthesis enzyme
  155. MT0887 [H] COG0315 (167) Molybdenum cofactor biosynthesis enzyme
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 48/69
  156. MT0892 [H] COG2896 (360) Molybdenum cofactor biosynthesis enzyme
  157. MT3192 [H] COG2896 (368) Molybdenum cofactor biosynthesis enzyme
  158. MT3427 [H] COG2896 (395) Molybdenum cofactor biosynthesis enzyme
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 49/69
  159. MT0068 [C] COG0277 (479) FAD/FMN-containing dehydrogenases
  160. MT1767 [C] COG0277 (461) FAD/FMN-containing dehydrogenases
  161. MT1824 [C] COG0277 (446) FAD/FMN-containing dehydrogenases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 50/69
  162. MT3424_2 [H] COG0314 (141) Molybdopterin converting factor, large subunit
  163. MT0889 [H] COG0314 (141) Molybdopterin converting factor, large subunit
  164. MT3201 [H] COG0314 (147) Molybdopterin converting factor, large subunit
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 51/69
  165. MT0079_1 [V] COG1136 (236) ABC-type antimicrobial peptide transport system, ATPase component
  166. MT1014 [V] COG1136 (248) ABC-type antimicrobial peptide transport system, ATPase component
  167. MT2640_1 [V] COG1136 (242) ABC-type antimicrobial peptide transport system, ATPase component
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 52/69
  168. MT0881 [E] COG0436 (397) Aspartate/tyrosine/aromatic aminotransferase
  169. MT2351 [E] COG1168 (387) Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
  170. MT0081 [E] COG1168 (390) Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 53/69
  171. MT3373_1 [P] COG0659 (506) Sulfate permease and related transporters (MFS superfamily)
  172. MT1781 [P] COG0659 (560) Sulfate permease and related transporters (MFS superfamily)
  173. MT1748 [P] COG0659 (486) Sulfate permease and related transporters (MFS superfamily)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 54/69
  174. MT1261 [O] COG0265 (528) Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
  175. MT1011 [O] COG0265 (446) Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
  176. MT0133 [O] COG0265 (355) Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 55/69
  177. MT0282 [L] COG3285 (394) Predicted eukaryotic-type DNA primase
  178. MT0965_1 [L] COG3285 (291) Predicted eukaryotic-type DNA primase
  179. MT3835 [L] COG3285 (346) Predicted eukaryotic-type DNA primase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 56/69
  180. MT3303 [K] COG1309 (228) Transcriptional regulator
  181. MT0252 [K] COG1309 (204) Transcriptional regulator
  182. MT1047 [K] COG1309 (202) Transcriptional regulator
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 57/69
  183. MT3905 [L] COG3464 (444) Transposase and inactivated derivatives
  184. MT1353 [L] COG3464 (444) Transposase and inactivated derivatives
  185. MT0767 [L] COG3464 (104) Transposase and inactivated derivatives
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 58/69
  186. MT1707 [R] COG0488 (591) ATPase components of ABC transporters with duplicated ATPase domains
  187. MT2552 [R] COG0488 (558) ATPase components of ABC transporters with duplicated ATPase domains
  188. MT1519 [R] COG0488 (542) ATPase components of ABC transporters with duplicated ATPase domains
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 59/69
  189. MT3392 [C] COG1012 (494) NAD-dependent aldehyde dehydrogenases
  190. MT1224 [C] COG1012 (543) NAD-dependent aldehyde dehydrogenases
  191. MT0777 [C] COG1012 (510) NAD-dependent aldehyde dehydrogenases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 60/69
  192. MT1250 [M] COG0438 (387) Glycosyltransferase
  193. MT3116 [M] COG0438 (414) Glycosyltransferase
  194. MT0504 [M] COG0438 (480) Glycosyltransferase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 61/69
  195. MT0959 [P] COG0226 (370) ABC-type phosphate transport system, periplasmic component
  196. MT0961 [P] COG0226 (374) ABC-type phosphate transport system, periplasmic component
  197. MT0955 [P] COG0226 (389) ABC-type phosphate transport system, periplasmic component
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 62/69
  198. MT0920 [C] COG0372 (431) Citrate synthase
  199. MT1163 [C] COG0372 (393) Citrate synthase
  200. MT0912 [C] COG0372 (373) Citrate synthase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 63/69
  201. MT0451 [O] COG0464 (728) ATPases of the AAA+ class
  202. MT2175 [O] COG0464 (609) ATPases of the AAA+ class
  203. MT3714 [O] COG0465 (760) ATP-dependent Zn proteases
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 64/69
  204. MT0280 [P] COG2223 (463) Nitrate/nitrite transporter
  205. MT0274 [P] COG2223 (469) Nitrate/nitrite transporter
  206. MT2391 [P] COG2223 (515) Nitrate/nitrite transporter
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 65/69
  207. MT0996 Not in COG (118)
  208. MT2049 Not in COG (90)
  209. MT3369 Not in COG (145)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 66/69
  210. MT3923 [I] COG0204 (261) 1-acyl-sn-glycerol-3-phosphate acyltransferase
  211. MT3924 [I] COG0204 (251) 1-acyl-sn-glycerol-3-phosphate acyltransferase
  212. MT3925 [I] COG0204 (259) 1-acyl-sn-glycerol-3-phosphate acyltransferase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 67/69
  213. MT3928 [Q] COG1020 (468) Non-ribosomal peptide synthetase modules and related proteins
  214. MT3932 [Q] COG1020 (511) Non-ribosomal peptide synthetase modules and related proteins
  215. MT1219 [Q] COG1020 (472) Non-ribosomal peptide synthetase modules and related proteins
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 68/69
  216. MT3761 [E] COG0560 (287) Phosphoserine phosphatase
  217. MT2556_1 [E] COG0560 (290) Phosphoserine phosphatase
  218. MT0526 [E] COG0560 (308) Phosphoserine phosphatase
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg
     
    Connected component # 69/69
  219. MT3900 Not in COG (1094)
  220. MT3901 Not in COG (1094)
  221. MT3902 Not in COG (1098)
    3 nodes with Node Degree:       2 = min,       2 = max,       2.00 = avg